Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | ALPR1_RS19965 | Not Available | Positive | 4698105 - 4699850 | 65647.5 |
| t9ss type a sorting domain-containing protein | ALPR1_RS19970 | Not Available | Positive | 4700127 - 4701416 | 47736.1 |
| beta strand repeat-containing protein | ALPR1_RS19975 | Not Available | Positive | 4701811 - 4708518 | 220249.0 |
| hypothetical protein | ALPR1_RS19980 | Not Available | Negative | 4708586 - 4712689 | 154521.0 |
| rlua family pseudouridine synthase | ALPR1_RS19985 | Not Available | Negative | 4714460 - 4715494 | 39459.3 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | ALPR1_RS19990 | Not Available | Positive | 4715551 - 4716474 | 34400.2 |
| helix-turn-helix domain-containing protein | ALPR1_RS19995 | Not Available | Negative | 4716449 - 4717093 | 24601.0 |
| excinuclease abc subunit uvrb | ALPR1_RS20000 | Not Available | Negative | 4717116 - 4719155 | 77555.9 |
| duf4105 domain-containing protein | ALPR1_RS20005 | Not Available | Negative | 4719219 - 4720418 | 46348.1 |
| t9ss type a sorting domain-containing protein | ALPR1_RS20010 | Not Available | Positive | 4720457 - 4722772 | 84779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
