Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | ALPR1_RS19915 | Not Available | Positive | 4689412 - 4690248 | 30516.3 |
| hypothetical protein | ALPR1_RS19920 | Not Available | Positive | 4690238 - 4690759 | 19644.9 |
| penicillin-binding protein 2 | ALPR1_RS19925 | Not Available | Positive | 4690759 - 4692561 | 67231.4 |
| rod shape-determining protein roda | ALPR1_RS19930 | Not Available | Positive | 4692561 - 4693835 | 47365.5 |
| hd domain-containing protein | ALPR1_RS19935 | Not Available | Negative | 4693838 - 4694413 | 22244.1 |
| pycsar system effector family protein | ALPR1_RS19940 | Not Available | Negative | 4694430 - 4694996 | 21966.8 |
| hypothetical protein | ALPR1_RS19945 | Not Available | Negative | 4695144 - 4696262 | 42437.8 |
| 2fe-2s iron-sulfur cluster-binding protein | ALPR1_RS19950 | Not Available | Positive | 4696296 - 4696622 | 12347.1 |
| thymidine kinase | ALPR1_RS19955 | Not Available | Positive | 4696626 - 4697219 | 22178.0 |
| dna repair protein reco | ALPR1_RS19960 | Not Available | Positive | 4697209 - 4697898 | 26694.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
