Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | ALPR1_RS19860 | Not Available | Negative | 4675992 - 4676834 | 30956.4 |
| carbon starvation protein a | ALPR1_RS19865 | Not Available | Positive | 4677063 - 4678697 | 58406.8 |
| phosphatase pap2 family protein | ALPR1_RS19870 | Not Available | Negative | 4678712 - 4680250 | 57087.1 |
| hypothetical protein | ALPR1_RS19875 | Not Available | Negative | 4680261 - 4681190 | 34955.2 |
| hypothetical protein | ALPR1_RS19880 | Not Available | Negative | 4681226 - 4682329 | 40893.3 |
| hypothetical protein | ALPR1_RS19885 | Not Available | Negative | 4682453 - 4682998 | 21314.2 |
| translation initiation factor if-2 | ALPR1_RS19895 | Not Available | Negative | 4683380 - 4686253 | 105032.0 |
| transcription termination factor nusa | ALPR1_RS19900 | Not Available | Negative | 4686318 - 4687562 | 47852.1 |
| ribosome maturation factor rimp | ALPR1_RS19905 | Not Available | Negative | 4687568 - 4688041 | 17502.3 |
| rod shape-determining protein | ALPR1_RS19910 | Not Available | Positive | 4688376 - 4689404 | 37312.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
