Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | ALPR1_RS19565 | Not Available | Negative | 4614293 - 4615318 | 37642.4 |
| atpz/atpi family protein | ALPR1_RS19575 | Not Available | Negative | 4615766 - 4616002 | 9253.5 |
| tetratricopeptide repeat protein | ALPR1_RS19580 | Not Available | Positive | 4616146 - 4618770 | 101167.0 |
| penicillin-binding protein 1a | ALPR1_RS19585 | Not Available | Positive | 4618773 - 4621079 | 86795.2 |
| excinuclease abc subunit uvrc | ALPR1_RS19590 | Not Available | Positive | 4621144 - 4622949 | 68900.1 |
| gliding motility protein gldn | ALPR1_RS19595 | Not Available | Negative | 4622979 - 4623794 | 31657.4 |
| gliding motility protein gldm | ALPR1_RS19600 | Not Available | Negative | 4623827 - 4625434 | 57533.4 |
| gliding motility protein gldl | ALPR1_RS19605 | Not Available | Negative | 4625471 - 4626271 | 28471.9 |
| gliding motility lipoprotein gldk | ALPR1_RS19610 | Not Available | Negative | 4626334 - 4627428 | 41584.9 |
| type ix secretion system membrane protein porp/sprf | ALPR1_RS19615 | Not Available | Negative | 4627607 - 4628587 | 36282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
