Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m14 family metallopeptidase | ALPR1_RS19410 | Not Available | Positive | 4583561 - 4585297 | 65129.3 |
| hypothetical protein | ALPR1_RS19415 | Not Available | Negative | 4585638 - 4586201 | 20516.5 |
| duf4252 domain-containing protein | ALPR1_RS19420 | Not Available | Negative | 4586734 - 4587216 | 17756.4 |
| duf4252 domain-containing protein | ALPR1_RS19425 | Not Available | Negative | 4587239 - 4587778 | 20200.5 |
| hypothetical protein | ALPR1_RS19430 | Not Available | Negative | 4587783 - 4588208 | 16791.9 |
| rna polymerase sigma factor | ALPR1_RS19435 | Not Available | Negative | 4588205 - 4588696 | 19231.4 |
| Trna-phe | Not Available | Not Available | Positive | 4588972 - 4589047 | Not Available |
| 4fe-4s dicluster domain-containing protein | ALPR1_RS19445 | Not Available | Positive | 4589151 - 4590485 | 50030.6 |
| (fe-s)-binding protein | ALPR1_RS19450 | Not Available | Positive | 4590557 - 4591348 | 28829.8 |
| hypothetical protein | ALPR1_RS19455 | Not Available | Positive | 4591427 - 4591912 | 18265.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
