Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pvc-type heme-binding cxxch protein | ALPR1_RS01900 | Not Available | Negative | 425409 - 428516 | 114291.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | ALPR1_RS01905 | Not Available | Negative | 428789 - 432868 | 153678.0 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS01910 | Not Available | Positive | 433520 - 436642 | 117344.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS01915 | Not Available | Positive | 436663 - 438531 | 70361.4 |
| duf3823 domain-containing protein | ALPR1_RS01920 | Not Available | Positive | 438556 - 439260 | 25940.6 |
| family 43 glycosylhydrolase | ALPR1_RS01925 | Not Available | Positive | 439332 - 440396 | 39424.6 |
| beta-l-arabinofuranosidase domain-containing protein | ALPR1_RS01930 | Not Available | Positive | 440577 - 442727 | 82114.7 |
| glycoside hydrolase family 43 protein | ALPR1_RS01935 | Not Available | Positive | 442720 - 444267 | 57535.5 |
| glycoside hydrolase family 2 protein | ALPR1_RS01940 | Not Available | Positive | 444322 - 446172 | 69631.6 |
| aldose epimerase family protein | ALPR1_RS01945 | Not Available | Positive | 446257 - 447378 | 40950.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
