Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | ALPR1_RS19360 | Not Available | Negative | 4572634 - 4573116 | 17911.7 |
| saccharopine dehydrogenase c-terminal domain-containing protein | ALPR1_RS19365 | Not Available | Positive | 4573231 - 4574568 | 49789.1 |
| duf4249 domain-containing protein | ALPR1_RS19370 | Not Available | Negative | 4574565 - 4575629 | 39698.5 |
| trna1(val) (adenine(37)-n6)-methyltransferase | ALPR1_RS19375 | Not Available | Negative | 4575894 - 4576604 | 27021.4 |
| duf2179 domain-containing protein | ALPR1_RS19380 | Not Available | Negative | 4576604 - 4577206 | 23145.7 |
| cynx/nimt family mfs transporter | ALPR1_RS19385 | Not Available | Negative | 4577283 - 4578449 | 41741.6 |
| ferrochelatase | ALPR1_RS19390 | Not Available | Negative | 4578543 - 4579571 | 38882.0 |
| cation:proton antiporter | ALPR1_RS19395 | Not Available | Negative | 4579671 - 4580906 | 44073.6 |
| universal stress protein | ALPR1_RS19400 | Not Available | Negative | 4580913 - 4581743 | 31031.0 |
| m14 family metallopeptidase | ALPR1_RS19405 | Not Available | Positive | 4581956 - 4583548 | 58992.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
