Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc oxidoreductase | ALPR1_RS18965 | Not Available | Negative | 4480028 - 4481734 | 63326.6 |
| dinb family protein | ALPR1_RS18970 | Not Available | Positive | 4481881 - 4482336 | 17230.7 |
| m20/m25/m40 family metallo-hydrolase | ALPR1_RS18975 | Not Available | Positive | 4482409 - 4483695 | 47004.6 |
| glycoside hydrolase family 25 protein | ALPR1_RS18980 | Not Available | Positive | 4483711 - 4484505 | 30684.9 |
| sulfatase | ALPR1_RS18985 | Not Available | Positive | 4484577 - 4486079 | 57437.0 |
| sulfatase | ALPR1_RS18990 | Not Available | Negative | 4486081 - 4487727 | 62367.6 |
| na/pi cotransporter family protein | ALPR1_RS18995 | Not Available | Positive | 4487838 - 4488797 | 34885.7 |
| gfo/idh/moca family protein | ALPR1_RS19000 | Not Available | Positive | 4488934 - 4490448 | 56699.2 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS19005 | Not Available | Positive | 4490492 - 4491439 | 35228.8 |
| voc family protein | ALPR1_RS19010 | Not Available | Positive | 4491499 - 4491861 | 14019.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
