Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS18815 | Not Available | Negative | 4436241 - 4436858 | 24268.7 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS18820 | Not Available | Negative | 4437025 - 4438659 | 60963.8 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS18825 | Not Available | Negative | 4438678 - 4441644 | 108068.0 |
| vcbs repeat-containing protein | ALPR1_RS18830 | Not Available | Positive | 4442565 - 4445855 | 122974.0 |
| hypothetical protein | ALPR1_RS18835 | Not Available | Positive | 4446007 - 4446393 | 15077.0 |
| vcbs repeat-containing protein | ALPR1_RS18840 | Not Available | Positive | 4446403 - 4449705 | 122391.0 |
| vanadium-dependent haloperoxidase | ALPR1_RS18845 | Not Available | Positive | 4450039 - 4451382 | 49717.3 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | ALPR1_RS18850 | Not Available | Positive | 4451582 - 4453756 | 83675.6 |
| n-acetylmuramoyl-l-alanine amidase | ALPR1_RS18855 | Not Available | Negative | 4453797 - 4454696 | 34354.9 |
| glycoside hydrolase family 15 protein | ALPR1_RS18860 | Not Available | Negative | 4454880 - 4456661 | 68492.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
