Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | ALPR1_RS18765 | Not Available | Negative | 4423341 - 4424528 | 43135.9 |
| Trna-thr | Not Available | Not Available | Positive | 4424588 - 4424659 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4424693 - 4424768 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4424837 - 4424919 | Not Available |
| m1 family metallopeptidase | ALPR1_RS18785 | Not Available | Negative | 4425072 - 4427717 | 101336.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | ALPR1_RS18790 | Not Available | Positive | 4427785 - 4428279 | 18411.7 |
| ump kinase | ALPR1_RS18795 | Not Available | Positive | 4428412 - 4429122 | 25986.6 |
| ribosome recycling factor | ALPR1_RS18800 | Not Available | Positive | 4429133 - 4429693 | 20735.0 |
| duf5686 and carboxypeptidase regulatory-like domain-containing protein | ALPR1_RS18805 | Not Available | Negative | 4429790 - 4432441 | 102304.0 |
| fg-gap-like repeat-containing protein | ALPR1_RS18810 | Not Available | Negative | 4432818 - 4436138 | 123866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
