Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3467 domain-containing protein | ALPR1_RS18715 | Not Available | Negative | 4411465 - 4411785 | 11712.9 |
| dna-directed rna polymerase subunit beta' | ALPR1_RS18720 | Not Available | Negative | 4411849 - 4416162 | 160121.0 |
| dna-directed rna polymerase subunit beta | ALPR1_RS18725 | Not Available | Negative | 4416213 - 4420088 | 144351.0 |
| 50s ribosomal protein l7/l12 | ALPR1_RS18730 | Not Available | Negative | 4420245 - 4420628 | 12984.6 |
| 50s ribosomal protein l10 | ALPR1_RS18735 | Not Available | Negative | 4420675 - 4421217 | 20006.1 |
| 50s ribosomal protein l1 | ALPR1_RS18740 | Not Available | Negative | 4421220 - 4421918 | 24779.1 |
| 50s ribosomal protein l11 | ALPR1_RS18745 | Not Available | Negative | 4421929 - 4422372 | 15876.3 |
| transcription termination/antitermination protein nusg | ALPR1_RS18750 | Not Available | Negative | 4422376 - 4422933 | 20908.0 |
| preprotein translocase subunit sece | ALPR1_RS18755 | Not Available | Negative | 4422952 - 4423140 | 7274.94 |
| Trna-trp | Not Available | Not Available | Positive | 4423155 - 4423228 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
