Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS18520 | Not Available | Positive | 4387470 - 4388381 | 32884.5 |
| cysteine synthase cysm | ALPR1_RS18525 | Not Available | Negative | 4388378 - 4389256 | 31904.4 |
| serine o-acetyltransferase epsc | ALPR1_RS18530 | Not Available | Negative | 4389243 - 4390088 | 31036.0 |
| hypothetical protein | ALPR1_RS18535 | Not Available | Negative | 4390110 - 4390655 | 20677.9 |
| septum formation initiator family protein | ALPR1_RS18540 | Not Available | Negative | 4390636 - 4390923 | 11700.2 |
| phosphopyruvate hydratase | ALPR1_RS18545 | Not Available | Negative | 4391019 - 4392296 | 45502.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | ALPR1_RS18550 | Not Available | Negative | 4392317 - 4393414 | 40002.2 |
| 50s ribosomal protein l17 | ALPR1_RS18555 | Not Available | Negative | 4393532 - 4394077 | 20228.4 |
| dna-directed rna polymerase subunit alpha | ALPR1_RS18560 | Not Available | Negative | 4394084 - 4395073 | 37075.9 |
| 30s ribosomal protein s4 | ALPR1_RS18565 | Not Available | Negative | 4395112 - 4395717 | 22613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
