Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | ALPR1_RS01795 | Not Available | Negative | 400542 - 401876 | 49480.9 |
| carboxylesterase/lipase family protein | ALPR1_RS01800 | Not Available | Negative | 401977 - 403635 | 60542.4 |
| hypothetical protein | ALPR1_RS01810 | Not Available | Positive | 404156 - 405292 | 44074.1 |
| m14 family metallopeptidase | ALPR1_RS01815 | Not Available | Negative | 405382 - 407913 | 94158.8 |
| rhodanese-like domain-containing protein | ALPR1_RS01820 | Not Available | Positive | 408105 - 408416 | 11118.1 |
| crp/fnr family transcriptional regulator | ALPR1_RS01825 | Not Available | Positive | 408617 - 409213 | 23020.2 |
| nuclear transport factor 2 family protein | ALPR1_RS01830 | Not Available | Positive | 409282 - 409689 | 15588.5 |
| excinuclease abc subunit uvra | ALPR1_RS01835 | Not Available | Negative | 409911 - 412727 | 105015.0 |
| nicotinamide riboside transporter pnuc | ALPR1_RS01840 | Not Available | Positive | 412868 - 413485 | 23862.2 |
| aaa family atpase | ALPR1_RS01845 | Not Available | Positive | 413472 - 413999 | 20632.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
