Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4221 family protein | ALPR1_RS18370 | Not Available | Negative | 4345978 - 4347162 | 44951.1 |
| efflux rnd transporter permease subunit | ALPR1_RS18375 | Not Available | Negative | 4347231 - 4350434 | 121164.0 |
| efflux rnd transporter permease subunit | ALPR1_RS18380 | Not Available | Negative | 4350431 - 4353481 | 113319.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS18385 | Not Available | Negative | 4353485 - 4354555 | 38981.4 |
| septal ring lytic transglycosylase rlpa family protein | ALPR1_RS18390 | Not Available | Negative | 4354615 - 4355187 | 21770.9 |
| metallophosphoesterase family protein | ALPR1_RS18395 | Not Available | Positive | 4355254 - 4356498 | 46998.8 |
| aaa family atpase | ALPR1_RS18400 | Not Available | Positive | 4356495 - 4359527 | 116377.0 |
| alpha/beta hydrolase | ALPR1_RS18405 | Not Available | Negative | 4359571 - 4360182 | 22582.1 |
| ring-cleaving dioxygenase | ALPR1_RS18410 | Not Available | Negative | 4360175 - 4361125 | 35493.8 |
| ycei family protein | ALPR1_RS18415 | Not Available | Negative | 4361232 - 4361774 | 19649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
