Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | ALPR1_RS18320 | Not Available | Negative | 4334258 - 4335571 | 49978.6 |
| hypothetical protein | ALPR1_RS18325 | Not Available | Negative | 4335636 - 4336730 | 41825.2 |
| thiamine pyrophosphate-dependent enzyme | ALPR1_RS18330 | Not Available | Positive | 4337101 - 4339110 | 74534.8 |
| duf5723 family protein | ALPR1_RS18335 | Not Available | Positive | 4339173 - 4340495 | 48527.9 |
| cellulase family glycosylhydrolase | ALPR1_RS18340 | Not Available | Negative | 4340702 - 4341862 | 43861.9 |
| outer membrane beta-barrel protein | ALPR1_RS18345 | Not Available | Positive | 4342007 - 4342702 | 26185.4 |
| hypothetical protein | ALPR1_RS18350 | Not Available | Negative | 4342779 - 4343897 | 43152.0 |
| hypothetical protein | ALPR1_RS18355 | Not Available | Negative | 4343894 - 4344139 | 8760.49 |
| hypothetical protein | ALPR1_RS18360 | Not Available | Negative | 4344424 - 4345509 | 42129.3 |
| hypothetical protein | ALPR1_RS18365 | Not Available | Negative | 4345554 - 4345751 | 6980.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
