Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | ALPR1_RS18270 | Not Available | Negative | 4321745 - 4322437 | 25438.7 |
| s41 family peptidase | ALPR1_RS18275 | Not Available | Negative | 4322441 - 4324102 | 62110.7 |
| ribonuclease p protein component | ALPR1_RS18280 | Not Available | Negative | 4324095 - 4324487 | 15362.1 |
| 50s ribosomal protein l34 | ALPR1_RS18285 | Not Available | Negative | 4324536 - 4324694 | 6223.72 |
| m61 family peptidase | ALPR1_RS18290 | Not Available | Positive | 4324807 - 4326471 | 64628.9 |
| m16 family metallopeptidase | ALPR1_RS18295 | Not Available | Negative | 4326607 - 4328652 | 74830.6 |
| m16 family metallopeptidase | ALPR1_RS18300 | Not Available | Negative | 4328680 - 4330008 | 50517.7 |
| adenosine kinase | ALPR1_RS18305 | Not Available | Negative | 4330239 - 4331234 | 36141.0 |
| hypothetical protein | ALPR1_RS18310 | Not Available | Negative | 4331382 - 4332545 | 45853.6 |
| toxin-antitoxin system ywqk family antitoxin | ALPR1_RS18315 | Not Available | Negative | 4332857 - 4334113 | 48200.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
