Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | ALPR1_RS18220 | Not Available | Negative | 4310501 - 4310812 | 11289.9 |
| ribonucleotide-diphosphate reductase subunit beta | ALPR1_RS18225 | Not Available | Positive | 4311409 - 4312389 | 37738.9 |
| ribonucleoside-diphosphate reductase subunit alpha | ALPR1_RS18230 | Not Available | Positive | 4312435 - 4314834 | 90435.3 |
| duf1569 domain-containing protein | ALPR1_RS18235 | Not Available | Positive | 4314926 - 4315366 | 17267.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4315861 - 4315972 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4316113 - 4318978 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4319094 - 4319170 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4319214 - 4319290 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4319347 - 4320867 | Not Available |
| duf2480 family protein | ALPR1_RS18265 | Not Available | Negative | 4321239 - 4321748 | 19329.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
