Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ysc84-related protein | ALPR1_RS18170 | Not Available | Negative | 4300256 - 4300783 | 18877.4 |
| yran family protein | ALPR1_RS18175 | Not Available | Negative | 4300814 - 4301170 | 13995.7 |
| lipoyl(octanoyl) transferase lipb | ALPR1_RS18180 | Not Available | Positive | 4301250 - 4301975 | 27608.1 |
| hypothetical protein | ALPR1_RS18185 | Not Available | Positive | 4301972 - 4302373 | 15078.3 |
| 3'-5' exonuclease | ALPR1_RS18190 | Not Available | Positive | 4302385 - 4303134 | 29222.2 |
| ribonuclease r | ALPR1_RS18195 | Not Available | Positive | 4303189 - 4305390 | 84119.3 |
| polyprenyl synthetase family protein | ALPR1_RS18200 | Not Available | Positive | 4305353 - 4306339 | 37112.6 |
| rhomboid family intramembrane serine protease | ALPR1_RS18205 | Not Available | Positive | 4306341 - 4306970 | 23662.2 |
| vps10 domain-containing protein | ALPR1_RS18210 | Not Available | Negative | 4307005 - 4310058 | 113980.0 |
| 50s ribosomal protein l27 | ALPR1_RS18215 | Not Available | Negative | 4310207 - 4310467 | 9239.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
