Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | ALPR1_RS18010 | Not Available | Positive | 4271242 - 4271670 | 15230.4 |
| duf1080 domain-containing protein | ALPR1_RS18015 | Not Available | Positive | 4271678 - 4272418 | 27686.3 |
| sh3 domain-containing protein | ALPR1_RS18020 | Not Available | Negative | 4272468 - 4273193 | 27526.5 |
| Trna-lys | Not Available | Not Available | Positive | 4273327 - 4273399 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 4273612 - 4273685 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4273738 - 4273811 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 4273861 - 4273933 | Not Available |
| m1 family metallopeptidase | ALPR1_RS18055 | Not Available | Positive | 4274794 - 4277358 | 97619.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | ALPR1_RS18060 | Not Available | Negative | 4277461 - 4278465 | 35829.7 |
| s1 family peptidase | ALPR1_RS18065 | Not Available | Positive | 4278692 - 4279558 | 32699.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
