Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | ALPR1_RS17960 | Not Available | Negative | 4260550 - 4261713 | 44596.1 |
| family 16 glycosylhydrolase | ALPR1_RS17965 | Not Available | Positive | 4261850 - 4262638 | 29905.9 |
| mcp four helix bundle domain-containing protein | ALPR1_RS17970 | Not Available | Positive | 4262667 - 4263305 | 24746.2 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS17975 | Not Available | Negative | 4263306 - 4264181 | 32074.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | ALPR1_RS17980 | Not Available | Negative | 4264269 - 4264829 | 20195.2 |
| gmc oxidoreductase | ALPR1_RS17985 | Not Available | Negative | 4264847 - 4266526 | 62414.0 |
| hydroxypyruvate isomerase family protein | ALPR1_RS17990 | Not Available | Negative | 4266553 - 4267425 | 32503.9 |
| nucleoside permease | ALPR1_RS17995 | Not Available | Negative | 4267438 - 4268664 | 45347.9 |
| gfo/idh/moca family protein | ALPR1_RS18000 | Not Available | Positive | 4268918 - 4270087 | 43465.8 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS18005 | Not Available | Positive | 4270166 - 4271218 | 39223.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
