Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor domain-containing protein | ALPR1_RS17910 | Not Available | Negative | 4249582 - 4250391 | 30021.6 |
| rna polymerase sigma factor | ALPR1_RS17915 | Not Available | Negative | 4250391 - 4250924 | 20683.7 |
| dihydrolipoyl dehydrogenase | ALPR1_RS17920 | Not Available | Negative | 4251018 - 4252415 | 49526.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | ALPR1_RS17925 | Not Available | Positive | 4252709 - 4253455 | 26356.8 |
| chrd domain-containing protein | ALPR1_RS20450 | Not Available | Positive | 4253717 - 4254676 | 34028.2 |
| l-glutamate gamma-semialdehyde dehydrogenase | ALPR1_RS17935 | Not Available | Negative | 4255060 - 4256694 | 59650.0 |
| yjjg family noncanonical pyrimidine nucleotidase | ALPR1_RS17940 | Not Available | Negative | 4256778 - 4257473 | 26948.1 |
| arsr/smtb family transcription factor | ALPR1_RS17945 | Not Available | Negative | 4257480 - 4257863 | 15317.9 |
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS17950 | Not Available | Positive | 4257974 - 4258624 | 24317.5 |
| alkaline phosphatase pafa | ALPR1_RS17955 | Not Available | Positive | 4258846 - 4260480 | 60494.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
