Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | ALPR1_RS01745 | Not Available | Positive | 388175 - 388483 | 11549.1 |
| tetratricopeptide repeat protein | ALPR1_RS01750 | Not Available | Positive | 388505 - 389332 | 30230.6 |
| rne/rng family ribonuclease | ALPR1_RS01755 | Not Available | Positive | 389514 - 391085 | 59334.7 |
| hypothetical protein | ALPR1_RS01760 | Not Available | Negative | 391131 - 392351 | 47932.6 |
| lytr/algr family response regulator transcription factor | ALPR1_RS01765 | Not Available | Negative | 392390 - 393142 | 28917.8 |
| sensor histidine kinase | ALPR1_RS01770 | Not Available | Negative | 393139 - 394218 | 41391.4 |
| hypothetical protein | ALPR1_RS01775 | Not Available | Negative | 394293 - 394937 | 24204.3 |
| tonb-dependent receptor | ALPR1_RS01780 | Not Available | Negative | 394949 - 397108 | 79850.4 |
| m14 family zinc carboxypeptidase | ALPR1_RS01785 | Not Available | Negative | 397256 - 399055 | 68267.2 |
| sulfatase | ALPR1_RS01790 | Not Available | Negative | 399137 - 400516 | 52275.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
