Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | ALPR1_RS17860 | Not Available | Positive | 4237678 - 4240830 | 116072.0 |
| tolc family protein | ALPR1_RS17865 | Not Available | Positive | 4240839 - 4242272 | 53624.0 |
| abc transporter atp-binding protein | ALPR1_RS17870 | Not Available | Negative | 4242340 - 4243035 | 26225.7 |
| duf5687 family protein | ALPR1_RS17875 | Not Available | Negative | 4243032 - 4244522 | 56593.3 |
| nitroreductase family protein | ALPR1_RS17880 | Not Available | Positive | 4244623 - 4245345 | 27364.5 |
| four helix bundle protein | ALPR1_RS17885 | Not Available | Negative | 4245380 - 4245637 | 9604.63 |
| replication-associated recombination protein a | ALPR1_RS17890 | Not Available | Negative | 4245706 - 4246968 | 46600.4 |
| threonine aldolase family protein | ALPR1_RS17895 | Not Available | Negative | 4247058 - 4248071 | 36667.4 |
| glycerophosphodiester phosphodiesterase family protein | ALPR1_RS17900 | Not Available | Negative | 4248061 - 4249026 | 35854.4 |
| duf2721 domain-containing protein | ALPR1_RS17905 | Not Available | Negative | 4249016 - 4249474 | 17133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
