Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | ALPR1_RS17815 | Not Available | Positive | 4227274 - 4228848 | 59150.9 |
| duf3078 domain-containing protein | ALPR1_RS17820 | Not Available | Positive | 4228870 - 4229862 | 37120.3 |
| hypothetical protein | ALPR1_RS17825 | Not Available | Negative | 4229859 - 4230347 | 18154.3 |
| dna polymerase iii subunit gamma/tau | ALPR1_RS17830 | Not Available | Negative | 4230437 - 4231582 | 43212.7 |
| Tmrna,resume consensus sequence (at 87): tataattggcgaaaatac | Not Available | Not Available | Positive | 4231766 - 4232165 | Not Available |
| prolyl oligopeptidase family serine peptidase | ALPR1_RS17835 | Not Available | Negative | 4232256 - 4233518 | 46234.9 |
| metallophosphoesterase | ALPR1_RS17840 | Not Available | Negative | 4233738 - 4234787 | 39484.7 |
| cupin domain-containing protein | ALPR1_RS17845 | Not Available | Negative | 4235162 - 4235587 | 15731.1 |
| hypothetical protein | ALPR1_RS17850 | Not Available | Positive | 4235995 - 4236411 | 15691.9 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS17855 | Not Available | Positive | 4236568 - 4237653 | 41129.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
