Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | ALPR1_RS17765 | Not Available | Positive | 4218460 - 4219149 | 26146.9 |
| sensor histidine kinase | ALPR1_RS17770 | Not Available | Positive | 4219151 - 4220227 | 40447.3 |
| rlua family pseudouridine synthase | ALPR1_RS17775 | Not Available | Positive | 4220303 - 4221016 | 26993.7 |
| 50s ribosomal protein l13 | ALPR1_RS17780 | Not Available | Positive | 4221197 - 4221640 | 16231.6 |
| 30s ribosomal protein s9 | ALPR1_RS17785 | Not Available | Positive | 4221652 - 4222038 | 14633.9 |
| 30s ribosomal protein s2 | ALPR1_RS17790 | Not Available | Positive | 4222072 - 4222833 | 28377.6 |
| translation elongation factor ts | ALPR1_RS17795 | Not Available | Positive | 4223015 - 4223845 | 29382.3 |
| aminopeptidase p family protein | ALPR1_RS17800 | Not Available | Negative | 4223920 - 4225209 | 48900.6 |
| m16 family metallopeptidase | ALPR1_RS17805 | Not Available | Positive | 4225331 - 4226560 | 46892.2 |
| o-methyltransferase | ALPR1_RS17810 | Not Available | Positive | 4226563 - 4227207 | 24162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
