Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf349 domain-containing protein | ALPR1_RS17715 | Not Available | Positive | 4208676 - 4209923 | 49118.8 |
| duf2795 domain-containing protein | ALPR1_RS17720 | Not Available | Positive | 4210008 - 4210229 | 8671.73 |
| lytr/algr family response regulator transcription factor | ALPR1_RS17725 | Not Available | Negative | 4210267 - 4210986 | 27376.2 |
| sensor histidine kinase | ALPR1_RS17730 | Not Available | Negative | 4210983 - 4212023 | 39394.8 |
| liaf transmembrane domain-containing protein | ALPR1_RS17735 | Not Available | Negative | 4212055 - 4212915 | 30929.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ALPR1_RS17740 | Not Available | Negative | 4213042 - 4213725 | 25600.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | ALPR1_RS17745 | Not Available | Negative | 4213834 - 4214883 | 39666.6 |
| abc transporter permease | ALPR1_RS17750 | Not Available | Positive | 4215010 - 4216257 | 45528.5 |
| recombinase reca | ALPR1_RS17755 | Not Available | Negative | 4216318 - 4217337 | 36439.3 |
| duf3108 domain-containing protein | ALPR1_RS17760 | Not Available | Positive | 4217517 - 4218308 | 30548.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
