Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | ALPR1_RS17565 | Not Available | Negative | 4175532 - 4176227 | 25530.9 |
| 30s ribosomal protein s20 | ALPR1_RS17570 | Not Available | Negative | 4176321 - 4176575 | 9680.99 |
| zinc dependent phospholipase c family protein | ALPR1_RS17575 | Not Available | Positive | 4176883 - 4177725 | 32590.2 |
| alpha/beta hydrolase | ALPR1_RS17580 | Not Available | Negative | 4177772 - 4178692 | 34313.0 |
| alpha/beta hydrolase | ALPR1_RS17585 | Not Available | Negative | 4178726 - 4180321 | 59915.4 |
| amidohydrolase family protein | ALPR1_RS17590 | Not Available | Negative | 4180328 - 4180549 | 8193.75 |
| dinb family protein | ALPR1_RS17595 | Not Available | Negative | 4180714 - 4181181 | 18450.0 |
| hypothetical protein | ALPR1_RS17600 | Not Available | Negative | 4181386 - 4181793 | 15036.8 |
| yhdh/yhfp family quinone oxidoreductase | ALPR1_RS17605 | Not Available | Negative | 4182250 - 4183254 | 36283.2 |
| winged helix-turn-helix transcriptional regulator | ALPR1_RS17610 | Not Available | Positive | 4183384 - 4183710 | 12487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
