Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS17465 | Not Available | Negative | 4155218 - 4155415 | 7398.2 |
| trap transporter large permease | ALPR1_RS17470 | Not Available | Negative | 4155526 - 4156821 | 45447.5 |
| trap transporter small permease | ALPR1_RS17475 | Not Available | Negative | 4156821 - 4157312 | 18449.4 |
| trap transporter substrate-binding protein | ALPR1_RS17480 | Not Available | Negative | 4157337 - 4158323 | 36976.5 |
| gfo/idh/moca family protein | ALPR1_RS17485 | Not Available | Negative | 4158450 - 4159499 | 38245.8 |
| 3-dehydro-l-gulonate 2-dehydrogenase | ALPR1_RS17490 | Not Available | Negative | 4159496 - 4160509 | 37051.5 |
| voc family protein | ALPR1_RS17495 | Not Available | Negative | 4160523 - 4160906 | 14094.0 |
| rhamnogalacturonan acetylesterase | ALPR1_RS17500 | Not Available | Negative | 4161012 - 4161770 | 28928.6 |
| glycoside hydrolase family 28 protein | ALPR1_RS17505 | Not Available | Negative | 4161773 - 4163446 | 61344.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | ALPR1_RS17510 | Not Available | Positive | 4163738 - 4164577 | 31568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
