Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | ALPR1_RS17415 | Not Available | Positive | 4143612 - 4144445 | 31403.9 |
| hypothetical protein | ALPR1_RS17420 | Not Available | Negative | 4144576 - 4145016 | 16098.8 |
| abc transporter permease | ALPR1_RS17425 | Not Available | Negative | 4145047 - 4146291 | 45403.7 |
| abc transporter atp-binding protein | ALPR1_RS17430 | Not Available | Negative | 4146288 - 4146920 | 22840.8 |
| atp-binding protein | ALPR1_RS17435 | Not Available | Negative | 4146922 - 4148097 | 43633.6 |
| atp-binding protein | ALPR1_RS17440 | Not Available | Negative | 4148152 - 4151574 | 128729.0 |
| succinate--coa ligase subunit alpha | ALPR1_RS17445 | Not Available | Positive | 4151704 - 4152585 | 30001.3 |
| hypothetical protein | ALPR1_RS17450 | Not Available | Negative | 4152711 - 4153133 | 16465.0 |
| abc-f family atp-binding cassette domain-containing protein | ALPR1_RS17455 | Not Available | Positive | 4153305 - 4154936 | 61561.0 |
| type ii toxin-antitoxin system rele family toxin | ALPR1_RS17460 | Not Available | Negative | 4154955 - 4155221 | 10382.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
