Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | ALPR1_RS17365 | Not Available | Negative | 4133916 - 4136036 | 77819.9 |
| methylmalonyl-coa mutase family protein | ALPR1_RS17370 | Not Available | Negative | 4136033 - 4137433 | 53338.9 |
| chromosomal replication initiator protein dnaa | ALPR1_RS17375 | Not Available | Positive | 4137796 - 4139214 | 53523.1 |
| duf3298 and duf4163 domain-containing protein | ALPR1_RS17380 | Not Available | Negative | 4139231 - 4139971 | 27944.7 |
| methylmalonyl co-a mutase-associated gtpase meab | ALPR1_RS17385 | Not Available | Negative | 4139968 - 4140969 | 36165.8 |
| hypothetical protein | ALPR1_RS17390 | Not Available | Negative | 4140966 - 4141373 | 15533.6 |
| copd family protein | ALPR1_RS17395 | Not Available | Positive | 4141428 - 4141967 | 21175.8 |
| sco family protein | ALPR1_RS17400 | Not Available | Positive | 4141964 - 4142614 | 24604.1 |
| c-type cytochrome | ALPR1_RS17405 | Not Available | Positive | 4142616 - 4143065 | 16609.9 |
| hypothetical protein | ALPR1_RS17410 | Not Available | Negative | 4143062 - 4143484 | 16284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
