Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | ALPR1_RS17260 | Not Available | Negative | 4110443 - 4112893 | 91510.8 |
| rip metalloprotease rsep | ALPR1_RS17265 | Not Available | Negative | 4113272 - 4114591 | 47721.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | ALPR1_RS17270 | Not Available | Negative | 4114591 - 4115757 | 43019.0 |
| s1c family serine protease | ALPR1_RS17275 | Not Available | Positive | 4115985 - 4117427 | 51947.7 |
| nucleotidyltransferase substrate binding protein | ALPR1_RS17280 | Not Available | Positive | 4117584 - 4117997 | 15998.2 |
| ynce family protein | ALPR1_RS17285 | Not Available | Negative | 4118080 - 4119132 | 38354.6 |
| tonb-dependent receptor | ALPR1_RS17290 | Not Available | Negative | 4119129 - 4120988 | 69541.1 |
| abc transporter substrate-binding protein | ALPR1_RS17300 | Not Available | Positive | 4121430 - 4122575 | 43111.4 |
| iron abc transporter permease | ALPR1_RS17305 | Not Available | Positive | 4122565 - 4123593 | 36123.6 |
| abc transporter atp-binding protein | ALPR1_RS17310 | Not Available | Positive | 4123596 - 4124564 | 35765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
