Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | ALPR1_RS17010 | Not Available | Negative | 4044154 - 4045830 | 65109.6 |
| sulfatase | ALPR1_RS17015 | Not Available | Negative | 4046028 - 4047728 | 65435.8 |
| sulfatase | ALPR1_RS17020 | Not Available | Positive | 4047969 - 4049414 | 53698.7 |
| glycoside hydrolase family protein | ALPR1_RS17025 | Not Available | Positive | 4049411 - 4050637 | 45742.5 |
| tetr/acrr family transcriptional regulator | ALPR1_RS17030 | Not Available | Positive | 4050676 - 4051323 | 25321.6 |
| sulfatase-like hydrolase/transferase | ALPR1_RS17035 | Not Available | Positive | 4051325 - 4052815 | 55939.1 |
| atp-binding cassette domain-containing protein | ALPR1_RS17040 | Not Available | Positive | 4052923 - 4053543 | 23066.7 |
| hypothetical protein | ALPR1_RS20855 | Not Available | Positive | 4054131 - 4054604 | 18539.3 |
| hypothetical protein | ALPR1_RS17050 | Not Available | Negative | 4054635 - 4055111 | 18215.3 |
| lytr/algr family response regulator transcription factor | ALPR1_RS17055 | Not Available | Positive | 4055309 - 4056043 | 27849.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
