Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | ALPR1_RS01645 | Not Available | Positive | 360182 - 360787 | 22190.9 |
| outer membrane beta-barrel protein | ALPR1_RS01650 | Not Available | Positive | 360988 - 363417 | 90446.1 |
| serine hydrolase domain-containing protein | ALPR1_RS01655 | Not Available | Positive | 363482 - 364798 | 49115.2 |
| maoc family dehydratase | ALPR1_RS01660 | Not Available | Negative | 364849 - 365313 | 17551.0 |
| transglutaminase-like domain-containing protein | ALPR1_RS20155 | Not Available | Positive | 365515 - 367365 | 70759.5 |
| duf3857 domain-containing protein | ALPR1_RS01670 | Not Available | Positive | 367367 - 369289 | 73583.1 |
| class i sam-dependent methyltransferase | ALPR1_RS01675 | Not Available | Positive | 369338 - 370132 | 29750.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ALPR1_RS01680 | Not Available | Positive | 370135 - 370830 | 26718.9 |
| chloride channel protein | ALPR1_RS01685 | Not Available | Negative | 371280 - 373058 | 65347.4 |
| m28 family peptidase | ALPR1_RS01690 | Not Available | Negative | 373138 - 374052 | 34153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
