Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | ALPR1_RS16865 | Not Available | Negative | 4006308 - 4006997 | 26279.8 |
| sensor histidine kinase | ALPR1_RS16870 | Not Available | Negative | 4006985 - 4008103 | 43579.0 |
| abc transporter atp-binding protein | ALPR1_RS16875 | Not Available | Positive | 4008305 - 4009183 | 32211.4 |
| m1 family aminopeptidase | ALPR1_RS16880 | Not Available | Positive | 4009180 - 4012743 | 134370.0 |
| n-acetylmuramoyl-l-alanine amidase-like domain-containing protein | ALPR1_RS16885 | Not Available | Positive | 4012838 - 4013683 | 31700.6 |
| duf4184 family protein | ALPR1_RS20440 | Not Available | Negative | 4013750 - 4016443 | 101981.0 |
| response regulator | ALPR1_RS16895 | Not Available | Negative | 4016454 - 4016840 | 14454.5 |
| phosphomannose isomerase | ALPR1_RS16900 | Not Available | Negative | 4016981 - 4017475 | 19081.4 |
| pas domain s-box protein | ALPR1_RS20445 | Not Available | Negative | 4017472 - 4021542 | 155518.0 |
| heme no-binding domain-containing protein | ALPR1_RS16910 | Not Available | Negative | 4021539 - 4022081 | 20628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
