Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1214 domain-containing protein | ALPR1_RS16710 | Not Available | Negative | 3973039 - 3974118 | 40972.3 |
| duf1254 domain-containing protein | ALPR1_RS16715 | Not Available | Negative | 3974293 - 3975372 | 40453.7 |
| c25 family cysteine peptidase | ALPR1_RS16725 | Not Available | Negative | 3975722 - 3980746 | 187548.0 |
| porv/porq family protein | ALPR1_RS16730 | Not Available | Negative | 3980743 - 3981822 | 39684.2 |
| padr family transcriptional regulator | ALPR1_RS16735 | Not Available | Positive | 3982231 - 3982560 | 12418.9 |
| pspc domain-containing protein | ALPR1_RS16740 | Not Available | Positive | 3982648 - 3984600 | 72888.7 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | ALPR1_RS16745 | Not Available | Positive | 3984665 - 3986065 | 52967.5 |
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS16750 | Not Available | Positive | 3986090 - 3986548 | 16975.4 |
| rna polymerase sigma factor | ALPR1_RS16755 | Not Available | Positive | 3986731 - 3987300 | 21999.4 |
| hypothetical protein | ALPR1_RS16760 | Not Available | Positive | 3987293 - 3988108 | 30223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
