Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | ALPR1_RS16610 | Not Available | Positive | 3948756 - 3949358 | 22473.1 |
| voc family protein | ALPR1_RS16615 | Not Available | Positive | 3949439 - 3949813 | 14405.1 |
| nramp family divalent metal transporter | ALPR1_RS16620 | Not Available | Positive | 3950010 - 3951875 | 67812.5 |
| duf502 domain-containing protein | ALPR1_RS20435 | Not Available | Negative | 3951893 - 3952561 | 24543.4 |
| hypothetical protein | ALPR1_RS16630 | Not Available | Negative | 3952803 - 3953243 | 16851.2 |
| hnh endonuclease | ALPR1_RS16635 | Not Available | Negative | 3953338 - 3953847 | 19204.4 |
| sh3 domain-containing protein | ALPR1_RS16640 | Not Available | Negative | 3953849 - 3954646 | 30399.1 |
| ssra-binding protein | ALPR1_RS16645 | Not Available | Negative | 3954609 - 3955076 | 18004.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | ALPR1_RS16650 | Not Available | Negative | 3955079 - 3956092 | 36963.7 |
| translocation/assembly module tamb domain-containing protein | ALPR1_RS16655 | Not Available | Positive | 3956203 - 3960747 | 169621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
