Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | ALPR1_RS16510 | Not Available | Positive | 3923152 - 3923928 | 30182.1 |
| hypothetical protein | ALPR1_RS16515 | Not Available | Positive | 3923925 - 3924761 | 32103.6 |
| inositol oxygenase family protein | ALPR1_RS16520 | Not Available | Negative | 3924769 - 3925626 | 33950.8 |
| solute:sodium symporter family transporter | ALPR1_RS16525 | Not Available | Negative | 3925666 - 3927243 | 57677.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ALPR1_RS16530 | Not Available | Negative | 3927448 - 3927873 | 15066.1 |
| sigma-54-dependent transcriptional regulator | ALPR1_RS16535 | Not Available | Positive | 3928058 - 3929440 | 52369.1 |
| sensor histidine kinase | ALPR1_RS16540 | Not Available | Positive | 3929430 - 3930773 | 50467.5 |
| glycosyltransferase family 39 protein | ALPR1_RS16545 | Not Available | Positive | 3930837 - 3932366 | 58414.7 |
| duf3703 domain-containing protein | ALPR1_RS16550 | Not Available | Positive | 3932504 - 3932881 | 14164.3 |
| trab/gumn family protein | ALPR1_RS16555 | Not Available | Positive | 3933083 - 3933964 | 33687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
