Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6515 family protein | ALPR1_RS16460 | Not Available | Negative | 3912913 - 3913935 | 38399.6 |
| duf2092 domain-containing protein | ALPR1_RS16465 | Not Available | Negative | 3913954 - 3914685 | 27888.1 |
| hd domain-containing protein | ALPR1_RS16470 | Not Available | Negative | 3914756 - 3915364 | 23092.8 |
| pas domain-containing protein | ALPR1_RS16475 | Not Available | Positive | 3915437 - 3916513 | 41381.3 |
| sdr family oxidoreductase | ALPR1_RS16480 | Not Available | Negative | 3916556 - 3917428 | 31331.9 |
| hypothetical protein | ALPR1_RS16485 | Not Available | Positive | 3917529 - 3918335 | 29976.3 |
| adenosylhomocysteinase | ALPR1_RS16490 | Not Available | Negative | 3918384 - 3919703 | 48273.9 |
| biotin--[acetyl-coa-carboxylase] ligase | ALPR1_RS16495 | Not Available | Negative | 3919784 - 3920545 | 28804.8 |
| ribosome silencing factor | ALPR1_RS16500 | Not Available | Positive | 3920607 - 3920954 | 13109.5 |
| atp-dependent zinc metalloprotease ftsh | ALPR1_RS16505 | Not Available | Positive | 3921020 - 3923089 | 76615.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
