Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf819 domain-containing protein | ALPR1_RS16255 | Not Available | Negative | 3859425 - 3860555 | 39572.2 |
| voc family protein | ALPR1_RS16260 | Not Available | Positive | 3860711 - 3861553 | 30181.5 |
| degt/dnrj/eryc1/strs family aminotransferase | ALPR1_RS16270 | Not Available | Negative | 3861748 - 3862833 | 40068.4 |
| glycosyltransferase family 4 protein | ALPR1_RS16275 | Not Available | Negative | 3862814 - 3864103 | 49169.1 |
| nadp-dependent isocitrate dehydrogenase | ALPR1_RS16280 | Not Available | Negative | 3864221 - 3865675 | 53437.2 |
| enoyl-coa hydratase/isomerase family protein | ALPR1_RS16285 | Not Available | Positive | 3865891 - 3866676 | 28254.0 |
| lipopolysaccharide biosynthesis protein | ALPR1_RS16290 | Not Available | Positive | 3866691 - 3868196 | 56829.0 |
| tetratricopeptide repeat protein | ALPR1_RS16295 | Not Available | Positive | 3868397 - 3870088 | 64361.2 |
| duf4292 domain-containing protein | ALPR1_RS16300 | Not Available | Positive | 3870081 - 3870821 | 28202.0 |
| murein hydrolase activator envc family protein | ALPR1_RS16305 | Not Available | Positive | 3870827 - 3872074 | 47033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
