Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase family protein | ALPR1_RS16155 | Not Available | Positive | 3832848 - 3833384 | 20336.7 |
| sdr family nad(p)-dependent oxidoreductase | ALPR1_RS16160 | Not Available | Negative | 3833386 - 3834177 | 27665.7 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS16165 | Not Available | Negative | 3834221 - 3835330 | 40530.5 |
| c-type cytochrome | ALPR1_RS16170 | Not Available | Negative | 3835350 - 3837896 | 95045.2 |
| multidrug effflux mfs transporter | ALPR1_RS16175 | Not Available | Positive | 3838247 - 3839482 | 44336.4 |
| dead/deah box helicase | ALPR1_RS16180 | Not Available | Positive | 3839798 - 3840931 | 41919.3 |
| arylsulfatase | ALPR1_RS16185 | Not Available | Positive | 3840966 - 3842729 | 67378.0 |
| apc family permease | ALPR1_RS16190 | Not Available | Positive | 3842865 - 3844172 | 46466.4 |
| cation diffusion facilitator family transporter | ALPR1_RS16195 | Not Available | Positive | 3844282 - 3845148 | 32074.1 |
| class i sam-dependent methyltransferase | ALPR1_RS16200 | Not Available | Positive | 3845195 - 3845902 | 26443.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
