Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tmem175 family protein | ALPR1_RS16105 | Not Available | Positive | 3820998 - 3821585 | 22186.0 |
| hypothetical protein | ALPR1_RS16110 | Not Available | Positive | 3821592 - 3821978 | 14053.6 |
| acyl-coa thioesterase | ALPR1_RS16115 | Not Available | Positive | 3821978 - 3822454 | 18220.0 |
| duf808 domain-containing protein | ALPR1_RS16120 | Not Available | Negative | 3822488 - 3823369 | 31653.7 |
| beta-n-acetylhexosaminidase | ALPR1_RS16125 | Not Available | Negative | 3823421 - 3825457 | 77345.0 |
| gntp family permease | ALPR1_RS16130 | Not Available | Positive | 3825708 - 3827036 | 46413.5 |
| polysaccharide deacetylase family protein | ALPR1_RS16135 | Not Available | Positive | 3827058 - 3827846 | 29983.8 |
| catalase/peroxidase hpi | ALPR1_RS16140 | Not Available | Negative | 3827901 - 3830147 | 82073.9 |
| lema family protein | ALPR1_RS16145 | Not Available | Positive | 3830530 - 3831093 | 21507.6 |
| duf2207 domain-containing protein | ALPR1_RS16150 | Not Available | Positive | 3831129 - 3832838 | 64501.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
