Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | ALPR1_RS20750 | Not Available | Positive | 3785785 - 3786246 | 16635.5 |
| outer membrane beta-barrel family protein | ALPR1_RS15960 | Not Available | Positive | 3786300 - 3788186 | 70430.2 |
| duf2867 domain-containing protein | ALPR1_RS15965 | Not Available | Positive | 3788193 - 3788441 | 9682.78 |
| apc family permease | ALPR1_RS15970 | Not Available | Positive | 3788573 - 3790051 | 53697.2 |
| aldo/keto reductase | ALPR1_RS15975 | Not Available | Positive | 3790055 - 3791512 | 53794.3 |
| wd40/yvtn/bnr-like repeat-containing protein | ALPR1_RS15980 | Not Available | Negative | 3791515 - 3794622 | 115400.0 |
| rhamnogalacturonan lyase | ALPR1_RS15985 | Not Available | Negative | 3794783 - 3796618 | 67631.7 |
| hypothetical protein | ALPR1_RS15990 | Not Available | Positive | 3796988 - 3798430 | 54350.2 |
| duf5995 family protein | ALPR1_RS15995 | Not Available | Positive | 3798524 - 3799213 | 27267.7 |
| dicarboxylate/amino acid:cation symporter | ALPR1_RS16000 | Not Available | Negative | 3799210 - 3800391 | 41760.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
