Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export family protein | ALPR1_RS01545 | Not Available | Negative | 336481 - 337755 | 47992.4 |
| rubredoxin | ALPR1_RS01550 | Not Available | Negative | 337903 - 339345 | 55448.0 |
| nitrate reductase | ALPR1_RS01555 | Not Available | Negative | 339342 - 342866 | 130650.0 |
| mfs transporter | ALPR1_RS01560 | Not Available | Negative | 342971 - 344395 | 50862.8 |
| response regulator | ALPR1_RS01565 | Not Available | Negative | 344531 - 345193 | 24508.7 |
| atp-binding protein | ALPR1_RS01570 | Not Available | Negative | 345252 - 347063 | 68384.0 |
| duf4202 domain-containing protein | ALPR1_RS01575 | Not Available | Negative | 347067 - 347648 | 22533.2 |
| nitrite reductase small subunit nird | ALPR1_RS01580 | Not Available | Negative | 347660 - 348037 | 13868.5 |
| nitrite reductase large subunit nirb | ALPR1_RS01585 | Not Available | Negative | 348044 - 350554 | 92310.8 |
| nucleoside-diphosphate kinase | ALPR1_RS01590 | Not Available | Negative | 350861 - 351283 | 15121.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
