Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | ALPR1_RS15710 | Not Available | Negative | 3730097 - 3731524 | 53348.3 |
| yitt family protein | ALPR1_RS15715 | Not Available | Positive | 3731824 - 3732729 | 32875.1 |
| methionine--trna ligase | ALPR1_RS15720 | Not Available | Negative | 3732941 - 3735001 | 77611.6 |
| tetr/acrr family transcriptional regulator | ALPR1_RS15725 | Not Available | Negative | 3735084 - 3735716 | 24075.2 |
| dna ligase, nad-dependent | ALPR1_RS20840 | Not Available | Positive | 3735901 - 3736056 | 6019.02 |
| sulfatase | ALPR1_RS15730 | Not Available | Positive | 3736479 - 3738017 | 57888.2 |
| nad-dependent dna ligase liga | ALPR1_RS15740 | Not Available | Positive | 3738544 - 3740994 | 92118.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ALPR1_RS15745 | Not Available | Positive | 3741069 - 3741932 | 30835.7 |
| exodeoxyribonuclease vii large subunit | ALPR1_RS15750 | Not Available | Positive | 3741938 - 3743248 | 49284.2 |
| exodeoxyribonuclease vii small subunit | ALPR1_RS15755 | Not Available | Positive | 3743245 - 3743433 | 7163.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
