Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS15660 | Not Available | Negative | 3716399 - 3717166 | 29183.8 |
| voc family protein | ALPR1_RS15665 | Not Available | Positive | 3717336 - 3717773 | 16302.3 |
| hypothetical protein | ALPR1_RS15670 | Not Available | Negative | 3717827 - 3718921 | 41370.0 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS15675 | Not Available | Negative | 3719095 - 3720255 | 43067.6 |
| cusa/czca family heavy metal efflux rnd transporter | ALPR1_RS15680 | Not Available | Negative | 3720255 - 3724586 | 160842.0 |
| sensor histidine kinase | ALPR1_RS15685 | Not Available | Negative | 3724675 - 3726042 | 51726.0 |
| response regulator transcription factor | ALPR1_RS15690 | Not Available | Negative | 3726039 - 3726707 | 25669.1 |
| pepsy-associated tm helix domain-containing protein | ALPR1_RS15695 | Not Available | Negative | 3726918 - 3728135 | 46275.5 |
| duf6503 family protein | ALPR1_RS15700 | Not Available | Positive | 3728327 - 3729091 | 29314.4 |
| alpha-e domain-containing protein | ALPR1_RS15705 | Not Available | Negative | 3729104 - 3730090 | 38520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
