Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | ALPR1_RS15310 | Not Available | Positive | 3639419 - 3640366 | 35818.5 |
| duf1553 domain-containing protein | ALPR1_RS15315 | Not Available | Positive | 3640482 - 3643220 | 103900.0 |
| duf1501 domain-containing protein | ALPR1_RS15320 | Not Available | Positive | 3643222 - 3644730 | 56050.9 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS15325 | Not Available | Positive | 3644733 - 3645608 | 33169.8 |
| c-type cytochrome domain-containing protein | ALPR1_RS15330 | Not Available | Positive | 3645601 - 3646983 | 52361.5 |
| spx/mgsr family rna polymerase-binding regulatory protein | ALPR1_RS15335 | Not Available | Negative | 3646980 - 3647333 | 13521.3 |
| cell division protein ftsa | ALPR1_RS21100 | Not Available | Positive | 3647452 - 3647505 | 2019.38 |
| duf3667 domain-containing protein | ALPR1_RS15340 | Not Available | Positive | 3647527 - 3648504 | 37445.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | ALPR1_RS15345 | Not Available | Negative | 3648534 - 3649826 | 46391.2 |
| abc transporter substrate-binding protein | ALPR1_RS15350 | Not Available | Negative | 3649830 - 3651482 | 62011.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
