Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS15260 | Not Available | Positive | 3629436 - 3630764 | 47967.7 |
| ompp1/fadl family transporter | ALPR1_RS15265 | Not Available | Positive | 3630841 - 3632352 | 55760.4 |
| shikimate kinase | ALPR1_RS15270 | Not Available | Negative | 3632342 - 3632872 | 19936.1 |
| bt_3928 family protein | ALPR1_RS15275 | Not Available | Negative | 3632869 - 3633969 | 40768.9 |
| duf1599 domain-containing protein | ALPR1_RS15280 | Not Available | Negative | 3633962 - 3634510 | 21253.6 |
| dihydropteroate synthase | ALPR1_RS15285 | Not Available | Positive | 3634527 - 3635408 | 33077.8 |
| diadenylate cyclase cdaa | ALPR1_RS15290 | Not Available | Positive | 3635405 - 3636286 | 32994.9 |
| helix-turn-helix domain-containing protein | ALPR1_RS15295 | Not Available | Negative | 3636315 - 3636926 | 23058.0 |
| duf5715 family protein | ALPR1_RS15300 | Not Available | Positive | 3637239 - 3637961 | 27804.4 |
| glycine c-acetyltransferase | ALPR1_RS15305 | Not Available | Negative | 3638069 - 3639265 | 43305.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
