Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | ALPR1_RS15110 | Not Available | Negative | 3595915 - 3596628 | 27627.2 |
| helix-turn-helix domain-containing protein | ALPR1_RS15115 | Not Available | Negative | 3597003 - 3599264 | 86267.5 |
| fmn-binding negative transcriptional regulator | ALPR1_RS15120 | Not Available | Positive | 3599362 - 3599976 | 23108.5 |
| hypothetical protein | ALPR1_RS15125 | Not Available | Negative | 3599996 - 3601597 | 60089.9 |
| endonuclease/exonuclease/phosphatase family protein | ALPR1_RS15130 | Not Available | Positive | 3601797 - 3602633 | 30841.7 |
| duf1080 domain-containing protein | ALPR1_RS15135 | Not Available | Positive | 3602635 - 3603495 | 31882.3 |
| duf2264 domain-containing protein | ALPR1_RS15140 | Not Available | Positive | 3603509 - 3604756 | 46405.7 |
| gfo/idh/moca family protein | ALPR1_RS15145 | Not Available | Negative | 3604827 - 3606212 | 52076.2 |
| duf2892 domain-containing protein | ALPR1_RS15150 | Not Available | Negative | 3606352 - 3606564 | 7591.57 |
| glycoside hydrolase family 113 | ALPR1_RS15155 | Not Available | Negative | 3606742 - 3607782 | 40781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
