Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pycsar system effector family protein | ALPR1_RS15060 | Not Available | Negative | 3582705 - 3583274 | 21152.5 |
| b12-binding domain-containing radical sam protein | ALPR1_RS15065 | Not Available | Negative | 3583370 - 3585550 | 82944.8 |
| nyn domain-containing protein | ALPR1_RS15070 | Not Available | Positive | 3585694 - 3586464 | 28691.0 |
| dsre family protein | ALPR1_RS15075 | Not Available | Negative | 3586857 - 3587270 | 15536.2 |
| hypothetical protein | ALPR1_RS15080 | Not Available | Negative | 3587282 - 3587962 | 24629.4 |
| thiol-activated cytolysin family protein | ALPR1_RS15085 | Not Available | Positive | 3588306 - 3589847 | 55947.9 |
| serine/threonine-protein kinase | ALPR1_RS15090 | Not Available | Negative | 3589870 - 3592410 | 95617.1 |
| ecf-type sigma factor | ALPR1_RS15095 | Not Available | Negative | 3592424 - 3592921 | 19383.4 |
| m20/m25/m40 family metallo-hydrolase | ALPR1_RS15100 | Not Available | Positive | 3593073 - 3594698 | 60740.2 |
| duf4421 domain-containing protein | ALPR1_RS15105 | Not Available | Positive | 3594833 - 3595918 | 41664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
