Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase family protein | ALPR1_RS14960 | Not Available | Negative | 3558197 - 3558997 | 30334.3 |
| putative lps assembly protein lptd | ALPR1_RS14965 | Not Available | Positive | 3559104 - 3561791 | 101136.0 |
| arginine deiminase family protein | ALPR1_RS14970 | Not Available | Negative | 3561788 - 3563002 | 45939.7 |
| duf4197 domain-containing protein | ALPR1_RS14975 | Not Available | Positive | 3563222 - 3563974 | 27337.7 |
| response regulator | ALPR1_RS14980 | Not Available | Positive | 3564137 - 3564574 | 16692.1 |
| lysine--trna ligase | ALPR1_RS14985 | Not Available | Negative | 3564663 - 3566369 | 64770.9 |
| proline dehydrogenase family protein | ALPR1_RS14990 | Not Available | Negative | 3566478 - 3567659 | 44857.8 |
| chorismate mutase | ALPR1_RS14995 | Not Available | Positive | 3568184 - 3569281 | 41723.4 |
| 3-dehydroquinate synthase | ALPR1_RS15000 | Not Available | Positive | 3569368 - 3570411 | 38925.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALPR1_RS15005 | Not Available | Positive | 3570422 - 3571663 | 45877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
